Re-run this search with the SEG filter switched off
Re-run this search as BLASTX i.e. nucleotide query
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Kpol_2002.8
(985 letters)
Database: Seq/AA.fsa
114,666 sequences; 53,481,399 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
Kpol_2002.8 s2002 complement(11914..14871) [2958 bp, 985 aa] {ON... 1493 0.0
TPHA0E04010 Chr5 (839903..842800) [2898 bp, 965 aa] {ON} Anc_1.5... 399 e-123
Smik_3.14 Chr3 complement(20226..23567) [3342 bp, 1113 aa] {ON} ... 281 4e-79
Suva_3.152 Chr3 complement(228665..232087) [3423 bp, 1140 aa] {O... 269 1e-74
Skud_3.3 Chr3 complement(6855..10313) [3459 bp, 1152 aa] {ON} YC... 261 7e-72
NDAI0A00140 Chr1 complement(8373..11648) [3276 bp, 1091 aa] {ON}... 258 3e-71
KAFR0D00140 Chr4 complement(13233..16358) [3126 bp, 1041 aa] {ON... 257 4e-71
NCAS0B09110 Chr2 (1746358..1749420) [3063 bp, 1020 aa] {ON} Anc_... 253 7e-70
SAKL0C00462g Chr3 complement(41257..44790) [3534 bp, 1177 aa] {O... 249 9e-68
YCL061C Chr3 complement(18816..22106) [3291 bp, 1096 aa] {ON} M... 248 1e-67
KNAG0C00220 Chr3 complement(33011..36496) [3486 bp, 1161 aa] {ON... 243 1e-65
TBLA0A07570 Chr1 (1874419..1878177) [3759 bp, 1252 aa] {ON} Anc_... 229 3e-61
ZYRO0F18480g Chr6 (1524051..1526933) [2883 bp, 960 aa] {ON} weak... 222 2e-59
CAGL0B00330g Chr2 complement(18031..21441) [3411 bp, 1136 aa] {O... 223 3e-59
TDEL0C06970 Chr3 (1264155..1266980) [2826 bp, 941 aa] {ON} Anc_1... 209 2e-55
Ecym_1008 Chr1 complement(13340..16696) [3357 bp, 1118 aa] {ON} ... 201 2e-52
KLTH0F00484g Chr6 complement(37017..39998) [2982 bp, 993 aa] {ON... 189 1e-48
KLLA0C00484g Chr3 complement(35397..38174) [2778 bp, 925 aa] {ON... 178 3e-45
AFR745W Chr6 (1803046..1806102) [3057 bp, 1018 aa] {ON} Syntenic... 160 2e-39
Kwal_33.13005 s33 complement(36797..39709) [2913 bp, 970 aa] {ON... 156 4e-38
Suva_7.197 Chr7 (361661..364201) [2541 bp, 846 aa] {ON} YGL073W ... 40 0.022
KLTH0D06556g Chr4 complement(570972..572342) [1371 bp, 456 aa] {... 33 4.1
KNAG0A07130 Chr1 complement(1119805..1120509) [705 bp, 234 aa] {... 32 5.6
Suva_1.24 Chr1 (39893..42442) [2550 bp, 849 aa] {ON} YAL041W (REAL) 32 9.7
>Kpol_2002.8 s2002 complement(11914..14871) [2958 bp, 985 aa] {ON}
complement(11914..14871) [2958 nt, 986 aa]
Length = 985
Score = 1493 bits (3864), Expect = 0.0, Method: Compositional matrix adjust. Identities = 782/985 (79%), Positives = 782/985 (79%)
Query: 1 MDFVFDGLDALKGKKRTTYKKVTDGDVEDEPKISEFNIELPGLGQSILFNNSKLKQIRNR 60
MDFVFDGLDALKGKKRTTYKKVTDGDVEDEPKISEFNIELPGLGQSILFNNSKLKQIRNR
Sbjct: 1 MDFVFDGLDALKGKKRTTYKKVTDGDVEDEPKISEFNIELPGLGQSILFNNSKLKQIRNR 60
Query: 61 LEGXXXXXXXXXXQAETQVIADTQIISNLYXXXXXXXXXXXRRFLQRTQIVEDHTQIIDA 120
LEG QAETQVIADTQIISNLY RRFLQRTQIVEDHTQIIDA
Sbjct: 61 LEGNNNDSENDSSQAETQVIADTQIISNLYEGGEDLEEKEERRFLQRTQIVEDHTQIIDA 120
Query: 121 SVTYSSKTIESNKMDNTQKYINASDSEPTQIQISKVDKLLKITDNLDSQKKVLDXXXXXX 180
SVTYSSKTIESNKMDNTQKYINASDSEPTQIQISKVDKLLKITDNLDSQKKVLD
Sbjct: 121 SVTYSSKTIESNKMDNTQKYINASDSEPTQIQISKVDKLLKITDNLDSQKKVLDTTLETQ 180
Query: 181 XXXXXYGKTQVDKTQVDKTQVDKTQIFPTLVADDEIKHSSTAVQTVDDNTHSNSELKINE 240
YGKTQVDKTQVDKTQVDKTQIFPTLVADDEIKHSSTAVQTVDDNTHSNSELKINE
Sbjct: 181 ELETQYGKTQVDKTQVDKTQVDKTQIFPTLVADDEIKHSSTAVQTVDDNTHSNSELKINE 240
Query: 241 IERQLDEEDQILKEKSMGTEYKRNIAPVMSKVKFSKNDFLEHFXXXXXXXXXXGVVKLSS 300
IERQLDEEDQILKEKSMGTEYKRNIAPVMSKVKFSKNDFLEHF GVVKLSS
Sbjct: 241 IERQLDEEDQILKEKSMGTEYKRNIAPVMSKVKFSKNDFLEHFDSSSSEEDEEGVVKLSS 300
Query: 301 TEPETAAMNLENSLPQFSKESKFIGLSNYENILKKDINKQNCIEFSDSEDETEVTSKVSR 360
TEPETAAMNLENSLPQFSKESKFIGLSNYENILKKDINKQNCIEFSDSEDETEVTSKVSR
Sbjct: 301 TEPETAAMNLENSLPQFSKESKFIGLSNYENILKKDINKQNCIEFSDSEDETEVTSKVSR 360
Query: 361 ASKATILSIKANLSRHKPAQSSINNKNALGNLFSDLKKATKAQILDHKKEIMEQKGYKMX 420
ASKATILSIKANLSRHKPAQSSINNKNALGNLFSDLKKATKAQILDHKKEIMEQKGYKM
Sbjct: 361 ASKATILSIKANLSRHKPAQSSINNKNALGNLFSDLKKATKAQILDHKKEIMEQKGYKME 420
Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGDQEEDFAISANELSDSE 480
NGDQEEDFAISANELSDSE
Sbjct: 421 EIEKEKEIVENLLEQEIERNRKIRIREKQKEELKKRKQRIENGDQEEDFAISANELSDSE 480
Query: 481 VPESDNDGEVMXXXXXXXXXXXXLRTQLDASTGIEKETEQDASRDSEKDSERDIDEENIL 540
VPESDNDGEVM LRTQLDASTGIEKETEQDASRDSEKDSERDIDEENIL
Sbjct: 481 VPESDNDGEVMSSNEEASDSDDELRTQLDASTGIEKETEQDASRDSEKDSERDIDEENIL 540
Query: 541 NIKNRKSKKIHXXXXXXXXXXXXXXXXQVEANHQPSLNTINLGHYGXXXXXXXXXXXXXX 600
NIKNRKSKKIH QVEANHQPSLNTINLGHYG
Sbjct: 541 NIKNRKSKKIHVVSESDSDSDSGENSVQVEANHQPSLNTINLGHYGDNLSQENNNERNNI 600
Query: 601 XXXXXXXXXLYKEMVXXXXXXXXXXXXXXXXXXXXXXXXGITDMFEVEAEESEDEWHGIG 660
LYKEMV GITDMFEVEAEESEDEWHGIG
Sbjct: 601 DSDESEDEELYKEMVKKEIDRRRDQERKQRQKLRELKDKGITDMFEVEAEESEDEWHGIG 660
Query: 661 GVDGELSDEYDSEVEKMIDDYSKENFNAGEIREKLAAENKDMDLKMVNRILNDIKNGGFR 720
GVDGELSDEYDSEVEKMIDDYSKENFNAGEIREKLAAENKDMDLKMVNRILNDIKNGGFR
Sbjct: 661 GVDGELSDEYDSEVEKMIDDYSKENFNAGEIREKLAAENKDMDLKMVNRILNDIKNGGFR 720
Query: 721 KRRNAXXXXXXXXXXXXXKAYRAKRRQLMKEKRLETDHNKKLMTNKKSHAFLESMVDDIV 780
KRRNA KAYRAKRRQLMKEKRLETDHNKKLMTNKKSHAFLESMVDDIV
Sbjct: 721 KRRNALEIELSDDEDDDLKAYRAKRRQLMKEKRLETDHNKKLMTNKKSHAFLESMVDDIV 780
Query: 781 EVKNPFDERDDNIMDDTPETDAEGDVNSNELLNKKKKFILSEAFVQKSLSFLSSSRNLEE 840
EVKNPFDERDDNIMDDTPETDAEGDVNSNELLNKKKKFILSEAFVQKSLSFLSSSRNLEE
Sbjct: 781 EVKNPFDERDDNIMDDTPETDAEGDVNSNELLNKKKKFILSEAFVQKSLSFLSSSRNLEE 840
Query: 841 FEMNNNLAKEQHSHAATDMFALKSHCSIKSLESLPGSHNNSISSKLDLLHEEIVSTPFSG 900
FEMNNNLAKEQHSHAATDMFALKSHCSIKSLESLPGSHNNSISSKLDLLHEEIVSTPFSG
Sbjct: 841 FEMNNNLAKEQHSHAATDMFALKSHCSIKSLESLPGSHNNSISSKLDLLHEEIVSTPFSG 900
Query: 901 LKQTSVXXXXXXXXXXXXXXXXGNKTVKVSKSYRTVGSAKASITYLGKARKLVXXXXXXX 960
LKQTSV GNKTVKVSKSYRTVGSAKASITYLGKARKLV
Sbjct: 901 LKQTSVIKSFSSSIDIDSKFKDGNKTVKVSKSYRTVGSAKASITYLGKARKLVPPKKKEH 960
Query: 961 XXXXXXXXTASASRLFDEQDNSFEQ 985
TASASRLFDEQDNSFEQ
Sbjct: 961 KPHSHKSKTASASRLFDEQDNSFEQ 985
>TPHA0E04010 Chr5 (839903..842800) [2898 bp, 965 aa] {ON} Anc_1.5
YCL061C
Length = 965
Score = 399 bits (1026), Expect = e-123, Method: Compositional matrix adjust. Identities = 336/1035 (32%), Positives = 487/1035 (47%), Gaps = 121/1035 (11%)
Query: 1 MDFVFDGLDALKGKKRTTYKKVTDGDVEDEPKISEF-----NIELPGLGQSILFNNSKLK 55
MD +FD L+ K KKRTTY K+ +E+E + + E+ L ILF NS L
Sbjct: 1 MDSLFDQLNHFK-KKRTTYDKIPHDLLEEEQESEDILKNKTAKEISQLDGGILFGNSILG 59
Query: 56 QIRNRL------------EGXXXXXXXXXXQAETQVIADTQIISNLYXXXXXXXXXXXRR 103
QIRNRL E Q TQ+ TQII+NLY
Sbjct: 60 QIRNRLNNIDNEDKDKGKEASESITSKDNEQDSTQIFPQTQIINNLYDGGEDLENEIFHN 119
Query: 104 FLQRTQIVEDH----------------TQIIDASVTYSSKTIESNKMDNTQKYINASDSE 147
++TQI+ D+ TQ+I + S K ++ ++NTQ + +++
Sbjct: 120 SFKKTQIITDNILIETNTNDKSTQYEKTQVITINERLSDKPLDV--VNNTQTVLVIENTQ 177
Query: 148 P------TQIQISKVDKLLKITDNLDSQKKVLDXXXXXXXXXXXYGKTQVDKTQVDKTQV 201
P TQ+ +++V+ L +T + + TQ ++
Sbjct: 178 PLPSEIKTQV-VNEVNSALPVTQPTQT----------------------IVATQANEVTY 214
Query: 202 DKTQIFPTLVADDEIKHSSTAVQTVDDNTHSNSELKINEIERQLDEEDQILKEKSMGTEY 261
D ++ PT VDD ++ LKI +IE++L+EE ++ KE GTE+
Sbjct: 215 DTQELMPT----------------VDDVAMRSTGLKITDIEKELEEEQRLAKETEFGTEF 258
Query: 262 KRNIAPVMSKVKFSKNDFLEHFXXXXXXXXXXGVVKLSSTEPETAAMNLENSLPQFSKES 321
K + KFSK DFL HF + ++ ++ +N K
Sbjct: 259 KFKESESKISKKFSKEDFLNHFDDSSSSEDETSKNEKGPNVDKSEVLHPDNKSKTLLKVK 318
Query: 322 KFIGLSNYENILKKDINKQNCIEFSDSEDETEVTSKVSRASKATILSIKANLSRHKPAQS 381
GL NYE+ L++ N + IEFS+S+++++ S ASKA IL+I+AN S+ +P S
Sbjct: 319 SINGLGNYEHNLRRKANNEQIIEFSESDEDSDTNISPSYASKAVILNIRANKSKQQPKVS 378
Query: 382 SINNKNALGNLFSDLKKATKAQILDHKKEIMEQKGYKMXXXXXXXXXXXXXXXXXXXXXX 441
+++ L L+++LK+A+K QI+ ++KE+ME+KG +
Sbjct: 379 QKSDQTTLLMLYNNLKRASKEQIVSYQKELMEKKGINLEELEKENEIVENLLEQEIARNQ 438
Query: 442 XXXXXXXXXXXXXXXXXXXXNGDQEEDFAISANELSDSEVP-----ESDNDGEVMXXXXX 496
N E+F +SANEL DS++P ES+N+ E
Sbjct: 439 KIRQREKQKQKKENQDDLNSNP---EEFDLSANELEDSDIPGSDFAESNNNSEKDDEEEE 495
Query: 497 XXXXXXXLRTQLDASTGIEKETEQDASRDSEKDSERDIDEEN-ILNIKNRKSKKIHXXXX 555
+ ST +DEE+ I RK KK
Sbjct: 496 NDEEEEDEQEDAPKST---------------------VDEEDEGFAIGKRKHKKTEIVDD 534
Query: 556 XXXXXXXXXXXXQVEANHQPSLNTINLGHYGXXXXXXXXXXXXXXXXXXXXXXXLYKEMV 615
V++ + NTI+LGHYG Y ++
Sbjct: 535 SDSEIEAQI----VDSKEIITANTIDLGHYGDNIIQQSRETLNETEESDEEDEERYNAII 590
Query: 616 XXXXXXXXXXXXXXXXXXXXXXXXGITDMFEVEAEESEDEWHGIGGVDGELSDEYDSEVE 675
G++ MFEVEAEESEDEWHGIGGVD + SD YDSEVE
Sbjct: 591 SEGIRKQKELEKREAKRLKEMKTSGVSKMFEVEAEESEDEWHGIGGVDSDFSDAYDSEVE 650
Query: 676 KMIDDYSKENFNAGEIREKLAAENKDMDLKMVNRILNDIKNGGFRKR-RNAXXXXXXXXX 734
KMIDDYS++NFN EIRE LA ENK+ DL +VN+IL DIKNGGFR R R
Sbjct: 651 KMIDDYSRQNFNPSEIREMLAKENKETDLALVNKILYDIKNGGFRTRKRRDRDLEFSDDD 710
Query: 735 XXXXKAYRAKRRQLMKEKRLETDHNKKLMTNKKSHAFLESMVDDIVEVKNPFDERDDNIM 794
KAYRAKRR LM+EKRL+ + +KK++ N KS AF ES+VDDI+E KNPFD+ + +I
Sbjct: 711 DDDLKAYRAKRRALMREKRLDIEGDKKIVKNPKSKAFFESIVDDIIETKNPFDDMNTSIE 770
Query: 795 D----DTPETDAEGDVN-SNELLNKKKKFILSEAFVQKSLSFLSSSRNLEEFEMNNNLAK 849
+TP D + D + + KKKK ++SE FVQ+SLSFL+S R +EFE+NN
Sbjct: 771 QIVEKETPTVDIDNDEKLATNVTKKKKKIVISEEFVQRSLSFLNSCREQDEFEINNQHNG 830
Query: 850 EQHSHAATDMFALKSHCSIKSLESLPGSHNNSISSKLDLLHEEIVSTPFSGLKQTSVXXX 909
+ + + D++ LK + SIK+L+S+ S ++SI+S L+ + + F+ L++TSV
Sbjct: 831 GEKATSTADLYTLKRYSSIKTLQSVTSSRSSSIASNLNEQPSQSSGSLFNDLRKTSVLNS 890
Query: 910 XXXXXXXXXXXXXGNKTVKVSKSYRTVGSAKASITYLGKARKLVXXXXXXXXXXXXXXXT 969
G K+VKVS +Y+TVGSA+ASITY+G +R+LV
Sbjct: 891 FSSDVDINSKFKEGTKSVKVSNAYKTVGSARASITYMGTSRRLVAPKKSRLTTSSKANSR 950
Query: 970 ASASRLFDEQDNSFE 984
+ SRLFD Q+ SFE
Sbjct: 951 TTPSRLFDNQEGSFE 965
>Smik_3.14 Chr3 complement(20226..23567) [3342 bp, 1113 aa] {ON}
YCL061C (REAL)
Length = 1113
Score = 281 bits (720), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 171/347 (49%), Positives = 212/347 (61%), Gaps = 38/347 (10%)
Query: 640 GITDMFEVEAEESEDEWHGIGGVDGELSDEYDSEVEKMIDDYSKENFNAGEIREKLAAEN 699
G+T+ FE+EAEES+DEWHGIGG DGE SDEYDS+VEKMIDDYSK NFN+ EIRE LAAEN
Sbjct: 737 GVTNFFEMEAEESDDEWHGIGGADGEGSDEYDSDVEKMIDDYSKNNFNSHEIREMLAAEN 796
Query: 700 KDMDLKMVNRILNDIKNGGFRKRR--NAXXXXXXXXXXXXXKAYRAKRRQLMKEKRLETD 757
K+MD+KM+N+IL DIKNGGFR +R N+ + YR KRR+LM+++RLE
Sbjct: 797 KEMDVKMINKILYDIKNGGFRNKRAKNSLELELSDDEDDVLQQYRLKRRELMRKRRLEIG 856
Query: 758 HNKKLMTNKKSHAFLESMVDDIVEVKNPFDERDDNIMDDTPETDAEGDVNSNELLN---- 813
KL+ N KS AF ESMV+DI+E KNPF +++ D T T + D N LN
Sbjct: 857 DGTKLVKNPKSKAFFESMVEDIMEYKNPFRAEEESNQDIT-STATDLDTLDNNSLNVRDS 915
Query: 814 -----------KKKKFILSEAFVQKSLSFLSSSRNLEEFEMNNNLAKEQHSH---AATDM 859
K KK I+SE FVQKSLSFL S+ N EFEM+ LAK QH + D+
Sbjct: 916 TRNNEKGPVDDKSKKIIISEDFVQKSLSFLKSN-NYNEFEMDKELAKMQHGNDDEPIEDL 974
Query: 860 FALKSHCSIKSLESLPGSHNNSISSK-----LDLLH--------EEIVSTPFSGLKQTSV 906
F LK H SIKS + S +S +S+ +DL E S+ SG K S+
Sbjct: 975 FTLKQHSSIKSFTN---SQTDSFTSRTVTTMIDLEKRTEDEDEMENGDSSLVSGFKHPSI 1031
Query: 907 XXXXXXXXXXXXXXXXGNKTVKVSKSYRTVGSAKASITYLGKARKLV 953
GNKTVK+SKSY+ VGS+KASITY+GK RKL+
Sbjct: 1032 VKSFASRTDINDKFKEGNKTVKISKSYKMVGSSKASITYMGKTRKLM 1078
Score = 82.0 bits (201), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 81/266 (30%), Positives = 129/266 (48%), Gaps = 44/266 (16%)
Query: 192 DKTQVD----KTQVD-KTQI--FPTLVADDEIKHSSTAVQTVDDNT-HSNSELKINEIER 243
D+TQ+D TQ D KTQI P ++ T QT+ D H+ LKI EI+
Sbjct: 256 DETQLDVMPQNTQSDNKTQIDTIPQTTHYEDKTQMDTMSQTLQDGVPHT---LKIREIQN 312
Query: 244 QLDEEDQILKEKSMGTEYKRNIAPVMSKVKFSKNDFLEHFXXXXXXXXXXGVVKLSSTEP 303
+L ED +E++ EY + + +K+KFSK FL F +K+ S P
Sbjct: 313 ELALEDS-RRERASNVEYTKPQKTIATKLKFSKESFLADFDDSSSNEDAE--IKVESAHP 369
Query: 304 ETAA--------MNLENSLPQFSKES--KFIGLSNYENILKKDINKQNCIEFSDSEDET- 352
+ N+E S+ + +K++ + LS+Y N LK++I+ CI
Sbjct: 370 KPLGNEEELHEDKNIEPSINEVTKKTDKRVPLLSSYANNLKREIDSSKCITLDLDSGSDD 429
Query: 353 --------------EVTSKVSRASKATILSIKANLSRHKP--AQSSINNKNAL---GNLF 393
E +S+ SKATIL++KA LS+ +Q + ++A LF
Sbjct: 430 DDNIVVDDRKLIKDEGALPISQLSKATILNLKARLSKQNQDISQRPLEGRDARLDHNKLF 489
Query: 394 SDLKKATKAQILDHKKEIMEQKGYKM 419
+ L+KA++ QILDH++E++E KG+K+
Sbjct: 490 NTLRKASRKQILDHQREVIETKGFKL 515
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 1 MDFVFDGLDALKGKKR-TTYKKVT-----DGDVEDEPKISEFNIELPGL-GQSILFNNSK 53
MD + L +L+ KKR TTYKKV D D D + + P L G LF N+
Sbjct: 1 MDDALNALSSLRSKKRVTTYKKVAIHIPDDNDNTDGNLYTNDIVAPPALTGNGFLFANAT 60
Query: 54 LKQIRNRLEGXXXXXXXXXXQ-AETQVIADTQIISNLY 90
L +++NRLEG + E + ++ +Q+I+NLY
Sbjct: 61 LNRVKNRLEGGKAPEQEHDNKDDEDEDVSSSQLIANLY 98
>Suva_3.152 Chr3 complement(228665..232087) [3423 bp, 1140 aa] {ON}
YCL061C (REAL)
Length = 1140
Score = 269 bits (687), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 172/347 (49%), Positives = 214/347 (61%), Gaps = 37/347 (10%)
Query: 640 GITDMFEVEAEESEDEWHGIGGVDGELSDEYDSEVEKMIDDYSKENFNAGEIREKLAAEN 699
G+T+ FE+EAEESEDEWHG+GG DGE SDEYDSEVEKMIDDYSK FN+ EIRE LAAEN
Sbjct: 763 GVTNFFEMEAEESEDEWHGVGGADGEGSDEYDSEVEKMIDDYSKNKFNSHEIREMLAAEN 822
Query: 700 KDMDLKMVNRILNDIKNGGFRKRR--NAXXXXXXXXXXXXXKAYRAKRRQLMKEKRLETD 757
K+MD+KM+N+IL DIKNGGFR +R N+ + YR KRR+LM+++RLE
Sbjct: 823 KEMDVKMINKILYDIKNGGFRNKRAKNSLELELSDDEDDVLQQYRLKRRELMRKRRLEIG 882
Query: 758 HNKKLMTNKKSHAFLESMVDDIVEVKNPFD---ERDDNIMDDTPETDAE-------GDVN 807
+ KL+ N KS AF ESMV+DI+E KNPF E D ++ + D + GD
Sbjct: 883 DDTKLVKNPKSKAFFESMVEDIMEFKNPFGAEKESDQDVTSTATDLDTQDNDNTKPGDNT 942
Query: 808 SNELLN-----KKKKFILSEAFVQKSLSFLSSSRNLEEFEMNNNLAKEQHSHA---ATDM 859
SN N K KK I+SE FVQKSLSFL S+ N +EFEM+ LA+ QH + D+
Sbjct: 943 SNNEHNKHVGDKSKKLIISEDFVQKSLSFLKSN-NYDEFEMDRELARIQHGNGEGDVVDL 1001
Query: 860 FALKSHCSIKSLESLPGSHNNSISSK-----LDLLH--------EEIVSTPFSGLKQTSV 906
F LK H SIKS + S NS+SS+ ++L E + G K SV
Sbjct: 1002 FTLKQHSSIKSFTN---SQTNSLSSRTMNTVINLEEHTEGNDEGENGDQSLIGGFKHPSV 1058
Query: 907 XXXXXXXXXXXXXXXXGNKTVKVSKSYRTVGSAKASITYLGKARKLV 953
GNKTVK+SKSY+TVGS+KASITY+GK RKL+
Sbjct: 1059 IKSFASRTDINDKFKEGNKTVKISKSYKTVGSSKASITYMGKTRKLM 1105
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 78/244 (31%), Positives = 122/244 (50%), Gaps = 40/244 (16%)
Query: 208 PTLVADDEIKHSSTAVQTVDDNTHSNSELKINEIERQLDEEDQILKEKSMGTEYKR--NI 265
P V DD + + A QT+ D LKI+E++ +L ED ++K+ TEY++
Sbjct: 293 PPTVHDDRTQMDTVA-QTMQDKVPPT--LKIHELQSELALED-FNRKKAQNTEYRKLQKT 348
Query: 266 APVMSKVKFSKNDFLEHFXXXXXXXXXXGVVKLSSTEPETA-----AMNLENSLPQFS-- 318
P++ + FSK FL F KL S++P+ +++ S PQ +
Sbjct: 349 IPIVKR--FSKESFLADFDNSSSDEDTN--FKLESSQPKQQQNGYEMIDISQSNPQPAEK 404
Query: 319 ---KESKFIGLSNYENILKKDINKQNCIEF---------------SDSEDETEVTSKVSR 360
K+ K LS Y N LK++I+ CI +D +E E +S+
Sbjct: 405 ENKKDKKVPLLSTYANNLKREIDSSKCITLDLDSGSDKDNDNHMDTDKLNEDESALPISQ 464
Query: 361 ASKATILSIKANLSRH--KPAQSSINNKNALGN---LFSDLKKATKAQILDHKKEIMEQK 415
SKATI ++KA LS+ K AQ S NK+ + L + L+KA++ QILDH++EI+E K
Sbjct: 465 LSKATIFNLKARLSKQNQKLAQGSNKNKDFKSDHNKLINTLRKASRKQILDHQREIVETK 524
Query: 416 GYKM 419
G+K+
Sbjct: 525 GFKL 528
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 1 MDFVFDGLDALKGKKR-TTYKKVTDGDVEDEPKISEFNIELPGL-------GQSILFNNS 52
MD + L +L KKR TTYKKV + DE ++ N+ + G+ G LF N+
Sbjct: 44 MDDALNALSSLTSKKRATTYKKVA-SPILDENYDTDGNLPIDGMNAPPALTGNGFLFGNA 102
Query: 53 KLKQIRNRLEGXXX-XXXXXXXQAETQVIADTQIISNLY 90
L +++NRLEG + E + + TQ+I+NLY
Sbjct: 103 TLNRVKNRLEGRNELGQDGQDKENEDEDVFSTQLIANLY 141
>Skud_3.3 Chr3 complement(6855..10313) [3459 bp, 1152 aa] {ON} YCL061C
(REAL)
Length = 1152
Score = 261 bits (666), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 167/343 (48%), Positives = 214/343 (62%), Gaps = 30/343 (8%)
Query: 640 GITDMFEVEAEESEDEWHGIGGVDGELSDEYDSEVEKMIDDYSKENFNAGEIREKLAAEN 699
GIT+ FE+EAEESEDEWHG+GG DGE S+EYDSEVEKMIDDYSK +FN+ EIRE LAAEN
Sbjct: 775 GITNFFEMEAEESEDEWHGVGGADGEGSEEYDSEVEKMIDDYSKNSFNSHEIREMLAAEN 834
Query: 700 KDMDLKMVNRILNDIKNGGFRKRR--NAXXXXXXXXXXXXXKAYRAKRRQLMKEKRLETD 757
K+MD+KM+NRIL DIKNGGFR +R N+ + YR KRR+LM+++RLE
Sbjct: 835 KEMDVKMINRILYDIKNGGFRNKRAKNSLELELSDDEDDVLQQYRLKRRELMRKRRLEIG 894
Query: 758 HNKKLMTNKKSHAFLESMVDDIVEVKNPFDERDDNIMD--------DTPETDA--EGDVN 807
+ KL+ N KS AF ESMV+DI+E KNPF +++ D DT + D+ GD
Sbjct: 895 DDTKLVKNPKSKAFFESMVEDIMEFKNPFKAEEESHQDLTSTATDLDTQDNDSIQIGDST 954
Query: 808 SN----ELLNKKKKFILSEAFVQKSLSFLSSSRNLEEFEMNNNLAKEQH---SHAATDMF 860
N + ++ KK I+SE FVQKSLSFL S+ N +EFEM+ A+ QH D+F
Sbjct: 955 RNNEHRRVDDRSKKTIISEDFVQKSLSFLRSN-NYDEFEMDKERARIQHDIGDEGVEDLF 1013
Query: 861 ALKSHCSIKSLESLPGSHNNS--ISSKLDLLH--------EEIVSTPFSGLKQTSVXXXX 910
LK H SIKS + P +S ++S +DL E + G K S+
Sbjct: 1014 TLKQHSSIKSFTNSPTDSLSSKRVNSMIDLEQPTEDNNEVENEDPSLIGGFKHPSIIKSF 1073
Query: 911 XXXXXXXXXXXXGNKTVKVSKSYRTVGSAKASITYLGKARKLV 953
GNKTVK+SK+Y+TVGS+KASITY+GK RKL+
Sbjct: 1074 ASRTDINDKFKEGNKTVKISKTYKTVGSSKASITYMGKTRKLM 1116
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 78/254 (30%), Positives = 121/254 (47%), Gaps = 42/254 (16%)
Query: 198 KTQVDKTQIFPTLVADDEIK-HSSTAVQTV-DDNTHSNSELKINEIERQLDEEDQILKEK 255
KTQ+D T A DE K T QT+ DD +H+ LKI E++ +L ED +EK
Sbjct: 314 KTQLDTM----TQTAHDEGKTQVDTMPQTIHDDVSHT---LKIRELQSELALEDS-KREK 365
Query: 256 SMGTEYKRNIAPVMSKVKFSKNDFLEHFXXXXXXXXXXGVV---KLSSTEPETAAMNLEN 312
+ EYK++ + + + FSK FL F + +L + + +
Sbjct: 366 ARNVEYKKSRRNIPTMINFSKESFLADFDNSSSDEGTDVQLEKSQLKQQQDDNEVHENKP 425
Query: 313 SLPQFSKESK-----FIGLSNYENILKKDINKQNCIEFSDS-----------------ED 350
S P K S+ LS+Y N LK++I+ CI +D
Sbjct: 426 SEPNSVKNSRESYKNVPLLSSYANNLKREIDSSKCIILDLDSDSDDDGDDYMGGNMSIKD 485
Query: 351 ETEVTSKVSRASKATILSIKANLSRHKPAQSSINNKNALGN-----LFSDLKKATKAQIL 405
E+ + +SR SKA IL++KA LS+ + + NKN LF+ L+KA++ QIL
Sbjct: 486 ESALP--ISRLSKAAILNLKARLSKQSQNLTQMPNKNKGAKVDHNKLFNILRKASRKQIL 543
Query: 406 DHKKEIMEQKGYKM 419
DH++E++E KG+K+
Sbjct: 544 DHQREVIETKGFKL 557
Score = 39.3 bits (90), Expect = 0.054, Method: Compositional matrix adjust. Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
Query: 1 MDFVFDGLDALKGKKR-TTYKKVTDG----DVEDEPKISEFNIELPG--LGQSILFNNSK 53
MD V + L +L KKR TTYKK+ D + + + N+ P G LF N+
Sbjct: 56 MDNVLEVLSSLTSKKRVTTYKKIASPIPDGDDDVDGDLLSNNMGAPPALTGNGFLFGNAT 115
Query: 54 LKQIRNRLEGXXXXXXXXXXQ-AETQVIADTQIISNLY 90
L +++NRLEG + E + TQ+I+NLY
Sbjct: 116 LNRVKNRLEGIDVPEDDRQIKDNENEDAVSTQLIANLY 153
>NDAI0A00140 Chr1 complement(8373..11648) [3276 bp, 1091 aa] {ON}
Anc_1.5 YCL061C
Length = 1091
Score = 258 bits (660), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 168/330 (50%), Positives = 210/330 (63%), Gaps = 18/330 (5%)
Query: 640 GITDMFEVEAEESEDEWHGIGGVDGELSDEYDSEVEKMIDDYSKENFNAGEIREKLAAEN 699
G+T FE+EAEESEDEWHGIGG+DGE+SDEYDS+VEKMIDDYSK NF+ EIRE LAAEN
Sbjct: 724 GVTKFFEMEAEESEDEWHGIGGIDGEMSDEYDSDVEKMIDDYSKANFDPNEIREMLAAEN 783
Query: 700 KDMDLKMVNRILNDIKNGGFRKRRNA--XXXXXXXXXXXXXKAYRAKRRQLMKEKRLE-T 756
K+MDL M+N+IL DIKNGGFRKR+ + Y KR++LM+++RLE
Sbjct: 784 KEMDLNMINKILYDIKNGGFRKRKRGGLELELSEDEDDDALREYHLKRKELMRKRRLELG 843
Query: 757 DHNKKLMTNKKSHAFLESMVDDIVEVKNPFDERD---------DNIMDDTPETDAE-GDV 806
D KKL+ N KS AF ESMV+DI + KN F++ +N DD E DA
Sbjct: 844 DDEKKLVKNPKSKAFFESMVEDITDDKNAFNDEPLGETSTQEINNTQDDMKEEDAAVVKE 903
Query: 807 NSNELLNKKKKFILSEAFVQKSLSFLSSSRNLEEFEMNNNLAKEQHSHAATDMFALKSHC 866
N + KKKK I+SE FVQ++LSFL SSR EEF MN NLAKEQH ++ +LK
Sbjct: 904 NGDSKRIKKKKTIISEEFVQRTLSFLKSSREDEEFAMNENLAKEQHGTKVENLLSLKQQS 963
Query: 867 SIKSLESLPGSHNNSISSKL---DLLHEEIVSTPFSGLKQTSVXXXXXXXXXXXXXXXXG 923
SIK +S S+N+S KL + ++ +P + K S+ G
Sbjct: 964 SIKVFQS--PSNNSSKVIKLDDINNDDDDDEDSPIALFKVPSILKSFGSKTDINEKFQDG 1021
Query: 924 NKTVKVSKSYRTVGSAKASITYLGKARKLV 953
NKTV +SKSYRTVGS+KASITYLGK+RKL+
Sbjct: 1022 NKTVTISKSYRTVGSSKASITYLGKSRKLM 1051
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 78/229 (34%), Positives = 117/229 (51%), Gaps = 34/229 (14%)
Query: 219 SSTA-VQTV-DDNTHSNSELKINEIERQLDEEDQILKEKSMGTEYKRNIAPVMSK-VKFS 275
SSTA V TV DD S S L I++ +++L+EE+Q L S EYK P+++ VKF+
Sbjct: 282 SSTALVGTVADDKLSSGSNLAIHKFQKELEEEEQ-LANNSKYKEYKGISKPILTNIVKFT 340
Query: 276 KNDFLEHFXXXXXXXXXXGVVKLSSTEPETAAMNLENSLPQFSKES-------------- 321
K+ FL+ F K+ T+ NS + S
Sbjct: 341 KDSFLQGFDNSSSSSSEEEGDKVKETKRNGKENTSSNSYSTKNNNSTASSDGTTIKPKIK 400
Query: 322 ------KFIGLSNYENILKKDINKQNCIEFS---DSEDETEVTSKVSRASKATILSIKAN 372
K LS YEN LK +N +N ++ +S D+TE + VSR SKATIL+IKA
Sbjct: 401 SPKKFSKLNTLSRYENKLKTVLNSKNQLQLGSDDESSDDTENSLPVSRTSKATILTIKAR 460
Query: 373 LSRHKPAQS-----SINNKNALGNLFSDLKKATKAQILDHKKEIMEQKG 416
LS+ K ++ ++N L LF +LKK+++ QIL++++E++E KG
Sbjct: 461 LSKQKSKKNVQKDGTVNTN--LNKLFENLKKSSRKQILENQRELIENKG 507
>KAFR0D00140 Chr4 complement(13233..16358) [3126 bp, 1041 aa] {ON}
Anc_1.5 YCL061C
Length = 1041
Score = 257 bits (657), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 168/363 (46%), Positives = 213/363 (58%), Gaps = 29/363 (7%)
Query: 640 GITDMFEVEAEESEDEWHGIGGVDGELSDEYDSEVEKMIDDYSKENFNAGEIREKLAAEN 699
GIT+ E EAEESEDEWHGIGG+DGE+SDEYDSEVEKMIDDYSK NFN EIR+ LA EN
Sbjct: 689 GITNFLEEEAEESEDEWHGIGGIDGEMSDEYDSEVEKMIDDYSKANFNPDEIRQMLADEN 748
Query: 700 KDMDLKMVNRILNDIKNGGFRKRR-NAXXXXXXXXXXXXXKAYRAKRRQLMKEKRLETDH 758
K+ D+KMV +IL DIKNGGFRKRR A K YR KRR+LM++KRLE
Sbjct: 749 KETDIKMVEKILYDIKNGGFRKRRKGAMDLELSDEEDDELKQYRLKRRELMRQKRLEVGE 808
Query: 759 NKKLMTNKKSHAFLESMVDDIVEVKNPF----DERDDNIMDDTPETDAEGDVNSNELL-- 812
+ L+ N KS AF ESMVDDIVEVKNPF +R I T + + + NSNE
Sbjct: 809 AETLVKNPKSKAFFESMVDDIVEVKNPFAVFEPQRSGTI---TTDDGTQENANSNEGAAS 865
Query: 813 -NKKKKFILSEAFVQKSLSFLSSSRNLEEFEMNNNLAKEQHSHAATDMFALKSHCSIKSL 871
N KK +LSE FVQ++LSFL+SS+++++F ++ E + D+ ALK SIKS
Sbjct: 866 QNPSKKVMLSEEFVQRTLSFLNSSKDMDQFAPARSMRAEANDELIEDLTALKKQSSIKSF 925
Query: 872 ESLPGSHNNSIS--------SKLDLLHEEIVSTPFSGLKQTSVXXXXXXXXXXXXXXXXG 923
++ S + + S DLL+ + + +S+ G
Sbjct: 926 KTTRASVSQEPTDFDKENDDSFDDLLNSRVGT--------SSIMKTFSATVDINDKFQEG 977
Query: 924 NKTVKVSKSYRTVGSAKASITYLGKARKLVXXXXXXXXXXXX--XXXTASASRLFDEQDN 981
KTVKVSK+Y++V S+KASITY+GK RKLV + S+LF QD
Sbjct: 978 VKTVKVSKAYKSVSSSKASITYMGKMRKLVAPQKKVANLSSSDIKNTNSRTSKLFSRQDE 1037
Query: 982 SFE 984
SFE
Sbjct: 1038 SFE 1040
Score = 81.3 bits (199), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 78/252 (30%), Positives = 126/252 (50%), Gaps = 43/252 (17%)
Query: 188 KTQVDKTQVDKTQVDKTQIFPTLVADDEIKHSSTAVQTVDDNTHSNSELKINEIERQLDE 247
KTQ D + V KTQ+D T ++ TV D LKI+EI+R+L+E
Sbjct: 265 KTQKDTSAVLKTQIDST------------TEGTSYSATVSDT------LKIHEIQRELEE 306
Query: 248 EDQILKEKSMGTEYKRNIAPVMSKVKFSKNDFLEHFXXXXXXXX--------XXGVVKLS 299
K K++ EYK+++ + + F+K + + F V L
Sbjct: 307 SQ---KTKTI-PEYKQHVRTPKNVIVFTKESYFDEFDSDDEEKEENLESEGDSQKVQLLK 362
Query: 300 STEPETAAMNLENSLPQFSKES-----KFIGLSNYENILKKDINKQNCIEFS-DSEDETE 353
+T P + N LP ++ S K GL+NYE LK+ +N I+ + DS+DE
Sbjct: 363 NTSPSDKS-NDGKRLPDKTRTSPSFKPKLHGLNNYELKLKRQLNSDQQIDLNLDSDDEDG 421
Query: 354 V-----TSKVSRASKATILSIKANLSRHKP-AQSSINNKNALGNLFSDLKKATKAQILDH 407
+ +S+ SKAT+ IKA LS+ +P + S ++K L LF+ L+KA++ QI++H
Sbjct: 422 IDRMGEKGPISQMSKATVFDIKARLSKKRPIVKISNDSKTTLHTLFNKLQKASRQQIIEH 481
Query: 408 KKEIMEQKGYKM 419
+KE++E+KG +
Sbjct: 482 QKEVIEKKGLNL 493
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 40/91 (43%), Positives = 54/91 (59%), Gaps = 9/91 (9%)
Query: 1 MDFVFDGLDALKGKKRTTYKKVTDGDVEDEPKISEFNIELPGL-GQSILFNNSKLKQIRN 59
MD +F L ALK KKRTTYKK++D D+E++ SE N + P L G+ LF+N L +I+
Sbjct: 1 MDGIFGNLQALKPKKRTTYKKISD-DLEND--TSESNNDPPALTGEGFLFDNPTLNRIKK 57
Query: 60 RLEGXXXXXXXXXXQAETQVIADTQIISNLY 90
RL+G T + TQ+ISNLY
Sbjct: 58 RLDGEEKDVVQY-----TMNFSQTQLISNLY 83
>NCAS0B09110 Chr2 (1746358..1749420) [3063 bp, 1020 aa] {ON} Anc_1.5
YCL061C
Length = 1020
Score = 253 bits (647), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 162/363 (44%), Positives = 206/363 (56%), Gaps = 37/363 (10%)
Query: 640 GITDMFEVEAEESEDEWHGIGGVDGELSDEYDSEVEKMIDDYSKENFNAGEIREKLAAEN 699
G+ +FE+EAEESEDEWHGIGG DGE+SDEYDSEVEKMIDDYSK NFN EIR+ LA EN
Sbjct: 675 GVNKLFEMEAEESEDEWHGIGGADGEVSDEYDSEVEKMIDDYSKSNFNPDEIRQMLALEN 734
Query: 700 KDMDLKMVNRILNDIKN---GGFRKRRNAXXXXXXXXXXXXXKAYRAKRRQLMKEKRLET 756
K+MDL M+ +IL DIKN R+ + Y ++R+LMK++ LE
Sbjct: 735 KEMDLNMITKILYDIKNGGFRKRRRGGLDLELSDDDEDDEELREYHKRKRELMKKRMLEI 794
Query: 757 DHNKKLMTNKKSHAFLESMVDDIVEVKNPF-------------DERDDNIMDDTPETDAE 803
+KKL+ N KS AF ESMV+DIV+ KN F D +++ D TP D
Sbjct: 795 GDDKKLIKNPKSKAFFESMVEDIVDEKNAFGDIESIEKSSTELDTQEEKEQDVTPGVD-- 852
Query: 804 GDVNSNELLNKKKKFILSEAFVQKSLSFLSSSRNLEEFEMNNNLAKEQHSHAATDMFALK 863
KKK ++SE FVQK+LSFL S R+LEEF + +LAKEQH D+F+LK
Sbjct: 853 -----------KKKNVISEEFVQKTLSFLRSGRDLEEFNIEEDLAKEQHGENVEDLFSLK 901
Query: 864 SHCSIKSLESLPGSHNNSISSKLDLLH--EEIVSTPFSGLKQTSVXXXXXXXXXXXXXXX 921
+IK N S ++ +DL++ E + S+P G K SV
Sbjct: 902 QRSTIKEF------RNPSQTNTIDLINNVENVESSPLGGFKPPSVIKSFSSRTDINEKFK 955
Query: 922 XGNKTVKVSKSYRTVGSAKASITYLGKARKLVXXXXXXXXXXXXXXXTASASRLFDEQDN 981
GNKTV +SK Y+TVGS+KASITYLGK+RKL+ + S LF D
Sbjct: 956 DGNKTVTISKVYKTVGSSKASITYLGKSRKLMPPKKNKNREKIGSKIKPTRSSLFSSHDE 1015
Query: 982 SFE 984
SFE
Sbjct: 1016 SFE 1018
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 62/192 (32%), Positives = 105/192 (54%), Gaps = 19/192 (9%)
Query: 236 LKINEIERQLDEEDQILKEKSMGTEYKRNIAPV-MSKVKFSKNDFLEHFXXXXX--XXXX 292
LKI+EI+++L+ E + EYK+ + + +KFSK L+ F
Sbjct: 278 LKIHEIQKELERE----RNSKELKEYKKPSKEIKVIPIKFSKTSLLDGFDNSSSDDELEV 333
Query: 293 XGVVKLSSTE--PETAAMNLENSLPQFSKESKFIGLSNYENILKKDINKQNCIEFSDSED 350
+K++ T+ PE++ K K GL+ YEN LKK + ++ I+ D
Sbjct: 334 QKDMKITRTKEKPESSIK-------PKIKPKKLTGLNTYENKLKKKLLEKKHIQLDSDSD 386
Query: 351 ETEVTSK---VSRASKATILSIKANLSRHKPAQSSINNKNALGNLFSDLKKATKAQILDH 407
+K +SR SKAT+L++KA LS+ KP +S+ + +L LF +LK+A++ QILDH
Sbjct: 387 NDSDIAKRFPISRTSKATLLNLKARLSKKKPVKSNKSTNTSLDVLFQNLKQASRKQILDH 446
Query: 408 KKEIMEQKGYKM 419
++E++E +G+K+
Sbjct: 447 QRELVENRGFKL 458
Score = 48.5 bits (114), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 1 MDFVFDGLDALKGKKRTTYKKVTDGDVEDEPKISEF--NIELPGLGQSILFNNSKLKQIR 58
M+ +F+ K +++TTYKK+ + DE ++E + P +G +F N+ + +IR
Sbjct: 1 MESIFEEFSLPKKQRKTTYKKIHEEPNNDEEALTEAVDVMAPPVIGNGFIFGNALIDKIR 60
Query: 59 NRLEGXXXXXXXXXXQAETQVIADTQIISNLY 90
NRL+G + +T V TQ+I NLY
Sbjct: 61 NRLDG-------KENKEDTPVPTQTQMIDNLY 85
>SAKL0C00462g Chr3 complement(41257..44790) [3534 bp, 1177 aa] {ON}
some similarities with uniprot|P25588 Saccharomyces
cerevisiae YCL061C MRC1 S-phase checkpoint protein found
at replication forks required for DNA replication also
required for Rad53p activation during DNA replication
stress where it forms a replication-pausing complex with
Tof1p and is phosphorylated by Mec1p protein involved in
replication checkpoint
Length = 1177
Score = 249 bits (635), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 150/332 (45%), Positives = 206/332 (62%), Gaps = 25/332 (7%)
Query: 640 GITDMFEVEAEESEDEWHGIGGVDGELSDEYDSEVEKMIDDYSKENFNAGEIREKLAAEN 699
G++ MFE+EAEESEDEWHG+GG DGELSDEYDSE+EKM+DDY+K F+ EIR+ LAAE+
Sbjct: 814 GVSKMFEMEAEESEDEWHGVGGADGELSDEYDSELEKMVDDYTKTTFDPAEIRQMLAAED 873
Query: 700 KDMDLKMVNRILNDIKNGGFRKR-RNAXXXXXXXXXXXXXKAYRAKRRQLMKEKRLETDH 758
K+ D K+VN+IL+DIKNGGFR+R + A + Y AKRR+L+++K LE
Sbjct: 874 KEYDEKIVNKILHDIKNGGFRRRGKGALDIELSDDEDDELQRYHAKRRELLRQKVLENGE 933
Query: 759 NKKLMTNKKSHAFLESMVDDIVEVKNPF------DERDDNI-----MDDTPETDAEGDVN 807
KL++N KSHAF ESMV+D+VE KNPF D I +D+ E + D
Sbjct: 934 ASKLVSNPKSHAFFESMVEDLVESKNPFSIGETADPDSGAISENDKVDNASEHGTQPDAG 993
Query: 808 SNELLNKKKKFILSEAFVQKSLSFLSSSRNLE-EFEMNNNLAKEQHSHAA------TDMF 860
+ ++K+ +S+ FVQ+SLSFL+S L+ EFE++ LAK QHS D+F
Sbjct: 994 GQPVRTERKRIKISQEFVQRSLSFLNSKDELDNEFELDRRLAKHQHSTLGDDNDDLEDLF 1053
Query: 861 ALKSHCSIKSLESLPGSHNNSISSKLDLLHEEIVSTPFSGLKQTSVXXXXXXXXXXXXXX 920
LK + IK+L + + + ++ ++D ++P +G K SV
Sbjct: 1054 TLKQNSCIKTLHTPARTSSRTVDLEVD------GNSPANGFKLPSVISSFSSRIDINEKF 1107
Query: 921 XXGNKTVKVSKSYRTVGSAKASITYLGKARKL 952
G KTVKVSKSY+T+G ++ASITYLGK RKL
Sbjct: 1108 KEGTKTVKVSKSYKTIGGSRASITYLGKVRKL 1139
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 87/305 (28%), Positives = 132/305 (43%), Gaps = 79/305 (25%)
Query: 187 GKTQVDKTQVDKTQ--VDKTQIFPTLVADD----EIKHSSTAVQT--------------- 225
G+TQ +VDKTQ ++ T PTL +D + S AV T
Sbjct: 213 GETQ----EVDKTQRILEATARDPTLSEEDFVAATVADGSEAVTTQLDTCVPDTSALGDV 268
Query: 226 ----VDDNTHSNSE-LKINEIERQLDEEDQILKEKSMGTEYKRNIAPVMSKVKFSKNDFL 280
D + H NS+ L I+EIE+ LD E++ +EK + TE K + ++ K KF K FL
Sbjct: 269 QPTAPDQSAHRNSQRLLIHEIEKDLDAEEE--REKRI-TEAKPHDVVLVVKKKFDKEAFL 325
Query: 281 EHFXXXXXXXXXXGVVKLSS-----TEPETAAMNLENSLP---------------QFS-- 318
+F + +EP + L S+P F+
Sbjct: 326 NNFDCSSSEGEEQEQEEQEEQTHLESEPASKRRKLFTSVPGNPLDSKDSEAGGSGNFASA 385
Query: 319 -------------------KESKFIGLSNYENILKKDINKQNCIEFSDSEDETEVTSKVS 359
+E+ ++ L++Y+N LK ++ + I+ S DE E + S
Sbjct: 386 IAATIGTTTDEGRSTRKDKEEAGWVPLNSYKNQLKARLDSKEHIDLDSSSDEDENSVPAS 445
Query: 360 RASKATILSIKANLSRHKP-----AQSSINNKNALGNLFSDLKKATKAQILDHKKEIMEQ 414
+ SKA +L IKA S+ + Q S +L LFS LKKA K QILDH++EI E+
Sbjct: 446 KMSKAAVLEIKARTSKRQGIKKTRQQPSTPRAPSLKELFSSLKKANKKQILDHRREITEK 505
Query: 415 KGYKM 419
+G +
Sbjct: 506 RGLNL 510
>YCL061C Chr3 complement(18816..22106) [3291 bp, 1096 aa] {ON}
MRC1S-phase checkpoint protein required for DNA
replication; interacts with and stabilizes Pol2p at
stalled replication forks during stress, where it forms a
pausing complex with Tof1p and is phosphorylated by
Mec1p; protects uncapped telomeres
Length = 1096
Score = 248 bits (633), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 162/345 (46%), Positives = 209/345 (60%), Gaps = 35/345 (10%)
Query: 640 GITDMFEVEAEESEDEWHGIGGVDGELSDEYDSEVEKMIDDYSKENFNAGEIREKLAAEN 699
G+T+ FE+EAEESEDEWHGIGG DGE SD+YDS++EKMIDDYSK NFN EIRE LAAEN
Sbjct: 714 GVTNFFEMEAEESEDEWHGIGGADGEGSDDYDSDLEKMIDDYSKNNFNPHEIREMLAAEN 773
Query: 700 KDMDLKMVNRILNDIKNGGFRKRR---NAXXXXXXXXXXXXXKAYRAKRRQLMKEKRLET 756
K+MD+KM+N+IL DIKNGGFR +R + + YR KRR+LM+++RLE
Sbjct: 774 KEMDIKMINKILYDIKNGGFRNKRAKNSLELELSDDDEDDVLQQYRLKRRELMRKRRLEI 833
Query: 757 DHNKKLMTNKKSHAFLESMVDDIVEVKNPFDERDDNIMDDTPET-------------DAE 803
+ KL+ N KS AF ESMV+DI+E KNPF ++ +D T D
Sbjct: 834 GDDAKLVKNPKSSAFFESMVEDIIEYKNPFGAEEEYNLDITSTATDLDTQDNSINVGDNT 893
Query: 804 GDVNSNELLNKKKKFILSEAFVQKSLSFLSSSRNLEEFEMNNNLAKEQHSH--AATDMFA 861
G+ + K KK I+SE FVQKSLSFL S+ N E+FE + L++ QH + A D++
Sbjct: 894 GNNEQKPVDQKNKKVIISEDFVQKSLSFLKSN-NYEDFETDKELSRIQHGNDEAIEDLYT 952
Query: 862 LKSHCSIKSLESLPGSHNNSISSK-----LDLLHE-------EIVSTPFSGL-KQTSVXX 908
LK + SIKS + S +S +SK +DL E T G+ K S+
Sbjct: 953 LKQNSSIKSFTN---SQTDSTTSKTVNTIIDLEKRPEDEDEVENGDTSLVGVFKHPSIIK 1009
Query: 909 XXXXXXXXXXXXXXGNKTVKVSKSYRTVGSAKASITYLGKARKLV 953
GNKTVK+ KSY+TVGS+KASITY+GK RKL+
Sbjct: 1010 SFASRTDINDKFKEGNKTVKILKSYKTVGSSKASITYMGKTRKLI 1054
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 82/266 (30%), Positives = 122/266 (45%), Gaps = 43/266 (16%)
Query: 189 TQVDKTQVDKTQVDKTQIF--PTLVADDEIKHSSTAVQTVDDNT-HSNSELKINEIERQL 245
TQ+D DKTQ P ++ T QT+ D H+ LKI EI+ +L
Sbjct: 242 TQMDVPPQTAHDEDKTQAIGIPQATHQEQKTQIDTVAQTLQDEVPHT---LKIREIQSEL 298
Query: 246 DEEDQILKEKSMGTEYKRNIAPVMSKVKFSKNDFLEHFXXXXXXXXXXGVVKLSSTEP-- 303
ED +EK+ EYK+ P+ +K FSK FL +KL + P
Sbjct: 299 ASEDS-KREKARNVEYKKPQKPIPTKKFFSKESFLA--DFDDSSSNEDDDIKLENAHPKP 355
Query: 304 --------ETAAMNLENSLPQFSKESKFIGLSNYENILKKDINKQNCI---------EFS 346
E ++ L + E + LS+Y N LK++I+ CI E+
Sbjct: 356 VQNDDELHENKSVELNLTDETRINEKRVPLLSSYANNLKREIDSSKCITLDLDSDSDEYG 415
Query: 347 D--------SEDETEVTSKVSRASKATILSIKANLSRHKPAQSSINNKNALGN-----LF 393
D S+DE+ + +S+ SKATIL++KA LS+ S NK+ L
Sbjct: 416 DDDMDSIKLSKDESVLP--ISQLSKATILNLKARLSKQNQKLSQRPNKSKDPKVDHNVLL 473
Query: 394 SDLKKATKAQILDHKKEIMEQKGYKM 419
+ L+KA++ QILDH+KE++E KG K+
Sbjct: 474 NTLRKASRKQILDHQKEVIETKGLKL 499
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 25/106 (23%)
Query: 1 MDFVFDGLDALKGKKRTT-YKKV----------TDG----DVEDEPKISEFNIELPGLGQ 45
MD L +L KKRTT YKKV T+G D+++ P+++ G
Sbjct: 1 MDDALHALSSLTAKKRTTTYKKVAVPILDENDNTNGNGPNDIDNPPELT---------GN 51
Query: 46 SILFNNSKLKQIRNRLEGXXXXXXXXXX-QAETQVIADTQIISNLY 90
LF N+ L +++NRLEG + ++ TQ+ISNLY
Sbjct: 52 GFLFANATLNRVKNRLEGKKAPEQNHNNGKDRSENSLPTQLISNLY 97
>KNAG0C00220 Chr3 complement(33011..36496) [3486 bp, 1161 aa] {ON}
Anc_1.5 YCL061C
Length = 1161
Score = 243 bits (619), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 151/323 (46%), Positives = 200/323 (61%), Gaps = 12/323 (3%)
Query: 640 GITDMFEVEAEESEDEWHGIGGVDGELSDEYDSEVEKMIDDYSKENFNAGEIREKLAAEN 699
G+++ FE EAEESEDEWHGIGG+DGE+SDEYDSEVEKMIDDYS+ + + EIR+ L +EN
Sbjct: 809 GVSNFFEEEAEESEDEWHGIGGIDGEVSDEYDSEVEKMIDDYSRADMDPEEIRKLLVSEN 868
Query: 700 KDMDLKMVNRILNDIKNGGFRKR-RNAXXXXXXXXXXXXXKAYRAKRRQLMKEKRLETDH 758
K+MD+KMVN+IL DIKNG FRKR R+ + YR KR +LMK++ L+
Sbjct: 869 KEMDVKMVNKILFDIKNGNFRKRGRDTLELELSDEEDDDLRQYRQKRNELMKQRLLDLGD 928
Query: 759 NKKLMTNKKSHAFLESMVDDIVEVKNPFDERDDNIMDDTPETDAEGDVNSNELLNKK--- 815
+KKL+ N K+ AF +S+V+DIVEVKNPF DN DT ET + NK+
Sbjct: 929 DKKLVKNVKTKAFFDSLVEDIVEVKNPFGVMSDNETQDTDETTTIDTQTRESVSNKEEKP 988
Query: 816 -----KKFILSEAFVQKSLSFLSSSRNLEEFEMNNNLAKEQHSHAATDMFALKSHCSIKS 870
KK +LSE FVQ+SLSFL+S+RNL EFE N +LA+ QH +D++ LK S+KS
Sbjct: 989 TQEKGKKTVLSEEFVQRSLSFLNSNRNLTEFEQNQDLARLQHDDDVSDLYTLKKQSSVKS 1048
Query: 871 LESLPGSHNNSISSKLDLLHEEIVSTPFSGLKQTSVXXXXXXXXXXXXXXXXGNKTVKVS 930
+S+ GS N I+ +D + + + S+ G KTVK
Sbjct: 1049 FKSV-GSKNEIIN--VDANDNSGTAVATATFRPPSIIKSFNSKLNVDDKFRNGKKTVKTF 1105
Query: 931 KSYRTVGSAKASITYLGKARKLV 953
KSY+ VG +K S+TY+ K RKL
Sbjct: 1106 KSYKAVGGSKTSVTYMNKVRKLT 1128
Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 69/204 (33%), Positives = 106/204 (51%), Gaps = 15/204 (7%)
Query: 226 VDDNTHSNSELKINEIERQLDEEDQILKEKSMGTEYKRNIA-PVMSKVKFSKNDFLEHFX 284
DD + LKI+EI+ Q+DEE + + + G E++++ P +V+F+K F+ F
Sbjct: 406 ADDVKSGGNTLKIHEIQTQIDEETRNMLNR--GVEHRKSRGVPSRVEVRFTKESFMADFE 463
Query: 285 XXXXXXXXXGVV-KLSSTEPETAAM-----NLENSLPQFSKESKFIGLSNYENILKKDIN 338
+++ T PET + N + K + GLS+YE IL+ +N
Sbjct: 464 ESDSASDMESDSDQINDTTPETGSSQNSDSNKARKPTEAPKTKRVTGLSSYETILRNKVN 523
Query: 339 KQNCIEFSD-----SEDETEVTSKVSRASKATILSIKANLSRHKPAQSSIN-NKNALGNL 392
C++ SE+E + SKVS+ASKA +L+IKA + K + N NK L +L
Sbjct: 524 DDECLDLGSDDTYSSEEEYDKESKVSQASKAAVLNIKAKALKKKAIVKAANTNKTTLDSL 583
Query: 393 FSDLKKATKAQILDHKKEIMEQKG 416
FSDLKK + QIL H+ EI+ KG
Sbjct: 584 FSDLKKKNRQQILSHQAEIIGTKG 607
Score = 38.1 bits (87), Expect = 0.14, Method: Compositional matrix adjust. Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 1 MDFVFDGLDALKGKKRTTYKKVTDGDVEDEPKISEFNIELPGLGQSILFNNSKLKQIRNR 60
MD + + +++K K+RTTYKKV DE + + G LF N+ + +I+NR
Sbjct: 1 MDDLLERFNSVKVKRRTTYKKVQQNST-DEAAGDDDCVPTSLAGNGFLFGNATVDKIKNR 59
Query: 61 L---EGXXXXXXXXXXQAETQV-IADTQIISNLY 90
L + +E Q+ ++ +Q++S LY
Sbjct: 60 LNNEDHPNSSIDVTKSSSEDQIPVSQSQLLSTLY 93
>TBLA0A07570 Chr1 (1874419..1878177) [3759 bp, 1252 aa] {ON} Anc_1.5
YCL061C
Length = 1252
Score = 229 bits (584), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 151/355 (42%), Positives = 193/355 (54%), Gaps = 50/355 (14%)
Query: 640 GITDMFEVEAEESEDEWHGIGGVDGELSDEYDSEVEKMIDDYSKENFNAGEIREKLAAEN 699
G + MF++EAEESEDEW GIGG DGE+SDEYDSEVEK+IDDYS+++FN EIR KL EN
Sbjct: 872 GASKMFDMEAEESEDEWFGIGGADGEVSDEYDSEVEKLIDDYSRQDFNPDEIRNKLMNEN 931
Query: 700 KDMDLKMVNRILNDIKNGGFRKR-RNAXXXXXXXXXXXXXKAYRAKRRQLMKEKRLETDH 758
K+MD+KMVNRIL DIKNGGFRKR RN + YR KRR++MK+KRLE +
Sbjct: 932 KEMDIKMVNRILYDIKNGGFRKRNRNNIDLELSDDEDDELREYRIKRREIMKKKRLEVTN 991
Query: 759 NKKLMTNKKSHAFLESMVDDIVEVKNPFDERDDNIMDDTPETDAEGDVNSNELLNK---- 814
K++ KS AF SMVDDIVE NPF M P D D N + + NK
Sbjct: 992 TDKILKTSKSKAFFMSMVDDIVETSNPF-------MITQPSDDDSDDNNMDSISNKNHKD 1044
Query: 815 -----------------------KKKFILSEAFVQKSLSFLSSSRNLEEFEMNNNLAKEQ 851
+KKF++SE FV K+LSFL+ S+ + EF+ N K Q
Sbjct: 1045 ANNAKKDKKDKRTDDHARLSQSSRKKFVMSEDFVHKTLSFLTKSKEVNEFQHVNEHYKSQ 1104
Query: 852 HSHAATDMFALKSHCSIKSLESLP-GSHNNSI------SSKLDLLH-----EEIVSTPFS 899
D+ +LK SIK++ L S + ++ D++H + P S
Sbjct: 1105 IG-TINDIQSLKQKSSIKTMHVLSMMSQDTNVDLDASDKDDDDMIHHAGSFDNSFDDPLS 1163
Query: 900 GL-KQTSVXXXXXXXXXXXXXXXXGNKTVKVSKSYRTVGSAKASITYLGKARKLV 953
+ K S+ GNKTV +S SY+TVG K SIT G+ RKLV
Sbjct: 1164 SVSKAPSIIKIFGSTHDINDKFKDGNKTVTISNSYKTVGGMKTSITSFGR-RKLV 1217
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 44/104 (42%), Positives = 62/104 (59%), Gaps = 1/104 (0%)
Query: 317 FSKESKFIGLSNYENILKKDINKQNCIE-FSDSEDETEVTSKVSRASKATILSIKANLSR 375
+K + + LS YEN LK+++ N I+ +SDSE+ T+ S ASKA IL I+ LS+
Sbjct: 571 IAKPKRKVILSQYENRLKENLLYNNSIDLYSDSEENTQSDILFSTASKAQILDIRHKLSK 630
Query: 376 HKPAQSSINNKNALGNLFSDLKKATKAQILDHKKEIMEQKGYKM 419
KP + L LF+ LKKA+K QI DH+K +E KG K+
Sbjct: 631 KKPQVKKKTIQTNLDQLFNKLKKASKKQIFDHQKNAIESKGLKL 674
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 32/65 (49%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 1 MDFVFDGLDALKGKKRTTYKKVTDGDVEDEPKISEFNIELP----GLGQSILFNNSKLKQ 56
MD VFD LD LK KKRTTYKKV + V E + I P L + LF N KL++
Sbjct: 3 MDAVFDSLDELKIKKRTTYKKVPE-QVATELDKAATTISNPVPSFNLSEGFLFANDKLEK 61
Query: 57 IRNRL 61
I+NRL
Sbjct: 62 IKNRL 66
>ZYRO0F18480g Chr6 (1524051..1526933) [2883 bp, 960 aa] {ON} weakly
similar to uniprot|P25588 Saccharomyces cerevisiae
YCL061C MRC1 S-phase checkpoint protein found at
replication forks required for DNA replication also
required for Rad53p activation during DNA replication
stress where it forms a replication-pausing complex with
Tof1p and is phosphorylated by Mec1p protein involved in
replication checkpoint
Length = 960
Score = 222 bits (566), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 150/352 (42%), Positives = 204/352 (57%), Gaps = 23/352 (6%)
Query: 640 GITDMFEVEAEESEDEWHGIGGVDGELSDEYDSEVEKMIDDYSKENFNAGEIREKLAAEN 699
G+ M E+EAEESEDEW G+GGVDG+LSDE+DS++E+MIDD++K N N ++R+ LA EN
Sbjct: 624 GLNKMLEMEAEESEDEWKGVGGVDGDLSDEHDSDLEEMIDDFTKSNENFDDVRQLLAKEN 683
Query: 700 KDMDLKMVNRILNDIKNGGFRKR-RNAXXXXXXXXXXXXXKAYRAKRRQLMKEKRLETDH 758
K++D KMVN+IL DIKNGGFRKR RNA + YR KRR+LMK+ R+E
Sbjct: 684 KELDEKMVNKILYDIKNGGFRKRGRNALDLELSDDEDEDLRNYRLKRRELMKKSRIEGKD 743
Query: 759 NKKLMTNKKSHAFLESMVDDIVEVKNPFDERDDNIMDDTPETDAEGDVNSNELLNKKKKF 818
+K N KS AFLESMVDDI E KNPF + + ++ D+T + D N+ K+K
Sbjct: 744 KEKAFRNAKSKAFLESMVDDIDESKNPFGDPEMDVEDNT-----DVDTQENDYPKNKEKN 798
Query: 819 ILSEAFVQKSLSFLSSSRNLEEFEMNNNLAKEQHSHAATDMFALKSHCSIKSLESLPGSH 878
LS+ FVQ+SLSFLS++ + EFE+ + D+ +LK + SI +L H
Sbjct: 799 TLSQEFVQRSLSFLSNNNSSREFELGEQIT---LGDEEQDVSSLKRNSSIHAL------H 849
Query: 879 NNSISSKLDL----LHEEIVSTPFSGLKQTSVXXXXXXXXXXXXXXXXGNKTVKVSKSYR 934
N+S K DL E+ ++ P K S+ G KTV VSKSYR
Sbjct: 850 NSSSPIKEDLEKENQDEDFITLP--NFKPPSLIKSLAGGFDPNNKFQSGKKTVTVSKSYR 907
Query: 935 TVGSAKASITYLGKARKLVXXXXXXXXXXXXXXXTASAS--RLFDEQDNSFE 984
VG +++SITY GK RKLV + + +L++ Q NSF+
Sbjct: 908 AVGGSRSSITYFGKMRKLVGPKNRNSTLSKGPRPASKPTMGKLWESQQNSFD 959
Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 122/450 (27%), Positives = 198/450 (44%), Gaps = 59/450 (13%)
Query: 1 MDFVFDGLDALKGKKRTTYKKVTDGDVEDEPKISEFNIELPGLGQSILFNNSKLKQIRNR 60
MD + + LD L K+RTTYKKV + E+E + + P LG LF NS + ++RNR
Sbjct: 1 MDSLLEKLDPLSSKRRTTYKKVFEPQEEEETQQISNSPPPPILGNGFLFQNSTIDKVRNR 60
Query: 61 LEGXXXXXXX------XXXQAETQVIADTQIISNLYXXXXXXXXXXXRRFL-----QRTQ 109
L Q + + TQ+I++LY R + +
Sbjct: 61 LRNAEDGANKVQQKEQEQEQEQETQLNQTQVIADLYEGAEELEEQNKERVRLPLSKKTSS 120
Query: 110 IVEDHTQIIDASVTYSSKTIESN-------KMDNTQKYIN--ASDSEPTQIQISKVDKLL 160
++ TQ+I + T +E+N + TQ+ N + D + IQ + ++
Sbjct: 121 ASQEKTQVIPWAPTVEG--VENNVEQGTDIHEEKTQQVPNEISYDQKTQAIQSFQQTEVE 178
Query: 161 KITDNLDSQKKVLDXXXXXXXXXXXYGKTQVDKTQVDK----TQVDKTQIFPTLVADDEI 216
+T + ++ LD Y T D+ + TQ+D + D +I
Sbjct: 179 PLTQRISEPERTLDVPT--------YAATSEDQLDTQEQNPITQLDISNSLLFQATDSDI 230
Query: 217 KHSSTAVQTVDDNTHSNSELKINEIERQLDEEDQILKEKSMGTEYKRNIAPVMSKVKFSK 276
S LK+++IE++L+E+ Q ++ EY+ PV K FSK
Sbjct: 231 PKSPP------------QRLKMHDIEKELEEKRQ-ERDHRRNIEYRAPEKPVNVKRVFSK 277
Query: 277 NDFLEHFXXXXXXXXXXGVVKLSSTE-----PETAAMNLENSLPQFSKESKFIGLSNYEN 331
FL++F +++L S + E LEN+ ++ F S YE
Sbjct: 278 EAFLKNFDEESSSEDE--LIELRSRDIEKKHTEKDKSTLENTTESSQRQRVF---SVYEY 332
Query: 332 ILKKDINKQNCIEFSDSEDETEVTS--KVSRASKATILSIKANLSRHKPAQSSINNKNAL 389
LK +++ + CI+ D EDE++ +SR SKAT+L IKA S+ +P K L
Sbjct: 333 KLKGELDSKRCIQLDDDEDESDEDVEVPLSRVSKATVLDIKARRSKQEPLSKIKQKKTTL 392
Query: 390 GNLFSDLKKATKAQILDHKKEIMEQKGYKM 419
+L LKKA+K QI DH+ E+M+ +GYK+
Sbjct: 393 NDLICTLKKASKKQITDHQNELMKSRGYKL 422
>CAGL0B00330g Chr2 complement(18031..21441) [3411 bp, 1136 aa] {ON}
similar to uniprot|P25588 Saccharomyces cerevisiae
YCL061c
Length = 1136
Score = 223 bits (567), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 155/349 (44%), Positives = 203/349 (58%), Gaps = 18/349 (5%)
Query: 640 GITDMFEVEAEESEDEWHGIGGVDGELSDEYDSEVEKMIDDYSKENFNAGEIREKLAAEN 699
G+ FE EAEES+DEW GIGGVDG+ EYDSEVEKMIDDYSK + +R+K+ EN
Sbjct: 802 GVNQYFEEEAEESDDEWRGIGGVDGDDFGEYDSEVEKMIDDYSKTEVDLTSLRQKIMDEN 861
Query: 700 KDMDLKMVNRILNDIKNGGFRKR-RNAXXXXXXXXXXXXXKAYRAKRRQLMKEKRLETDH 758
K+MDLK+VN+IL DIKNGGFRKR RN + +R KRR+LMK++ LE +
Sbjct: 862 KEMDLKLVNKILYDIKNGGFRKRGRNDMELEFSDDEDAELQEFRRKRRELMKQRMLENED 921
Query: 759 NKKLMTNKKSHAFLESMVDDIVEVKNPFDERDDNI---MDDTPETDAEGDVNSNELLNKK 815
KL N KS AF ESM+ D+VE KN FD+ D I ++ + D E + N + NK+
Sbjct: 922 TDKLTKNPKSKAFFESMIVDLVEDKNNFDDLSDQIELKEENITQEDNEKEYNEAK-SNKR 980
Query: 816 KKFILSEAFVQKSLSFLSSSRNLEEFEMNNNLAKEQHSHAATDMFALKSHCSIKSLESLP 875
K +SE FVQK+LSFL + + +EF+ + ++KE+ DM ALKS+ S+ L
Sbjct: 981 GKIRISEDFVQKTLSFLHNDESTQEFQPSFIMSKEK---GIGDMNALKSNSSLSFCSKL- 1036
Query: 876 GSHNNSISSKLDLLHEEIVSTPFSGLKQTSVXXXXXXXXXXXXXXXXGNKTVKVSKSYRT 935
S S K+ + EE V F K+ S+ GNK+VKVS SY+T
Sbjct: 1037 -----STSRKI-INDEEDVIEEFESFKRPSIIQSFSSKFTIDDKFKDGNKSVKVSTSYKT 1090
Query: 936 VGSAKASITYLGKARKLVXXXXXXXXXXXXXXXTASASRLFDEQDNSFE 984
VG +KASITYLGK RKLV T SRLF+ Q++ F+
Sbjct: 1091 VGGSKASITYLGKTRKLVPPKNGPTVRKRNSNNT---SRLFNIQNDPFD 1136
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 30/63 (47%), Positives = 45/63 (71%)
Query: 354 VTSKVSRASKATILSIKANLSRHKPAQSSINNKNALGNLFSDLKKATKAQILDHKKEIME 413
V K+S SKAT+L++K LS+ KP + N K++ LF++L+KATK QI+ H+KE+ME
Sbjct: 528 VIYKLSNKSKATLLNLKVRLSKKKPVKKVHNEKDSTNLLFNNLRKATKQQIMLHRKELME 587
Query: 414 QKG 416
+G
Sbjct: 588 SRG 590
Score = 37.0 bits (84), Expect = 0.26, Method: Compositional matrix adjust. Identities = 16/22 (72%), Positives = 19/22 (86%)
Query: 1 MDFVFDGLDALKGKKRTTYKKV 22
MDF+FD L+ +K KKRTTYKKV
Sbjct: 1 MDFLFDELEQVKIKKRTTYKKV 22
>TDEL0C06970 Chr3 (1264155..1266980) [2826 bp, 941 aa] {ON} Anc_1.5
YCL061C
Length = 941
Score = 209 bits (533), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 152/356 (42%), Positives = 207/356 (58%), Gaps = 32/356 (8%)
Query: 640 GITDMFEVEAEESEDEWHGIGGVDGELSDEYDSEVEKMIDDYSKENFNAGEIREKLAAEN 699
G+T+MF++EAEES+DEW G+GGVDGE D+YDS++EKMIDD+S NA +IR+ L AEN
Sbjct: 606 GVTNMFDMEAEESDDEWRGVGGVDGETIDDYDSDLEKMIDDFSNTTSNADQIRQLLMAEN 665
Query: 700 KDMDLKMVNRILNDIKNGGFRKRR-NAXXXXXXXXXXXXXKAYRAKRRQLMKEKRLETDH 758
K+ DLK VN+IL+DIKNGGFRKRR N Y+ ++ +LM+++RL+
Sbjct: 666 KETDLKTVNKILHDIKNGGFRKRRQNNLQLELSDDEDDELLNYKKRKLELMRKRRLQFGA 725
Query: 759 -NKKLMTNKKSHAFLESMVDDIVEVKNPFDERDDNIMDDTPETD--AEGDVNSNELLNKK 815
+KKL+ N +S AF ESMV+DI+++K+PF + +T E D +EG V++ + K
Sbjct: 726 DDKKLLKNSRSKAFFESMVEDIIDLKDPFSNQ-----AETSEKDKKSEGLVDA----SNK 776
Query: 816 KKFILSEAFVQKSLSFLSSSRNLEEFEMNNNLAKEQHSHAATDMFALKSHCSIKSLESLP 875
+K +S FVQ+SLSFLSSSR+ EFE+ Q TD+ +LK ++K+L
Sbjct: 777 QKDTISHEFVQQSLSFLSSSRDFSEFEVAR---VSQEGERNTDLNSLKQDSTVKTL---- 829
Query: 876 GSHNNSISSKLDLLHEEI------VSTPFSGLKQTSVXXXXXXXXXXXXXXXXGNKTVKV 929
+ +N IS HEE V + +S SV G KTV V
Sbjct: 830 YAPSNIISESERADHEEFDNSVLPVESSYS-----SVVKSFGFDLNANDKLKEGRKTVTV 884
Query: 930 SKSYRTVGSAKASITYLGKARKLVXXXXXXXXXXXXXX-XTASASRLFDEQDNSFE 984
SKSYRTVG KASITYLGK RKLV T S++F ++SFE
Sbjct: 885 SKSYRTVGGNKASITYLGKMRKLVAPKKSNAEVRTTSKLSTLGNSKIFRNFESSFE 940
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 34/96 (35%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Query: 325 GLSNYENILKKDIN-KQNCIEFSDSEDETEVTSKVSRASKATILSIKANLSRHKPAQSSI 383
L+ Y+ LK+ + + S+S+DE ++ S +KAT+L +KA LS+ +P S
Sbjct: 318 ALTAYQRELKEKAEIAKGVMLLSESDDEEDLAVSTSHEAKATVLKLKARLSKRRPPVESQ 377
Query: 384 NNKNALGNLFSDLKKATKAQILDHKKEIMEQKGYKM 419
+ K +L L +L+ +TK QILD +KE +E++G K
Sbjct: 378 HGKASLSALMKNLRNSTKRQILDRQKEGIERQGLKF 413
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 10/90 (11%)
Query: 1 MDFVFDGLDALKGKKRTTYKKVTDGDVEDEPKISEFNIELPGLGQSILFNNSKLKQIRNR 60
MD +F+ D K+R TY+K ED+ + + LG LFN+S L +++NR
Sbjct: 1 MDKLFESFDNAIKKRRATYQKAVQN--EDDEYTEDPLVPPAVLGNGFLFNSSTLDKVKNR 58
Query: 61 LEGXXXXXXXXXXQAETQVIADTQIISNLY 90
L + TQ I TQ++SNLY
Sbjct: 59 L--------NKDQEQGTQAIDTTQVLSNLY 80
>Ecym_1008 Chr1 complement(13340..16696) [3357 bp, 1118 aa] {ON}
similar to Ashbya gossypii AFR745W
Length = 1118
Score = 201 bits (512), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 126/322 (39%), Positives = 180/322 (55%), Gaps = 27/322 (8%)
Query: 640 GITDMFEVEAEESEDEWHGIGGVDGELSDEYDSEVEKMIDDYSKENFNAGEIREKLAAEN 699
G+ M E+EA+ESEDEWHG+GGVD E SDEYDS+++KMIDDY+K F+ EIR+ LA+E+
Sbjct: 781 GVNKMVELEADESEDEWHGVGGVDYEASDEYDSDLDKMIDDYNKNEFDPVEIRKILASED 840
Query: 700 KDMDLKMVNRILNDIKNGGFRKR-RNAXXXXXXXXXXXXXKAYRAKRRQLMKEKRLETDH 758
D MVN+IL+DIK GGFRKR R ++YRAKR K+K L+++H
Sbjct: 841 LQHDKNMVNKILHDIKTGGFRKRGRGELDLELSEDEDGILQSYRAKRWNEQKQKMLDSEH 900
Query: 759 NKKLMTNKKSHAFLESMVDDI-VEVKNPFDERDDNIMDDTPETDAEGDVNSNEL-LNKKK 816
N + +N KS F ESMVD+ + V+ TP++ N EL N K+
Sbjct: 901 NTSVKSNPKSLPFFESMVDEFTIPVERAL---------GTPDSPPAQSTNVLELKQNTKQ 951
Query: 817 KFILSEAFVQKSLSFLSSSRNLEEFEMNNNLAKEQ-----HSHAATDMFALKSHCSIKSL 871
K ++SE FV+++LSFL+S N+ N+ K +S D++ LK +IK L
Sbjct: 952 KIVISEHFVKQTLSFLTSDENMTNMRSEINVEKPNNDNDIYSSEVEDLYTLKETSTIKVL 1011
Query: 872 ESLPGSHNNSISSKLDLLHEEIVSTPFSGLKQTSVXXXXXXXXXXXXXXXXGNKTVKVSK 931
+ G +++E+ F G K SV G K+VK+S
Sbjct: 1012 NTYSGK---------PIVNEDEDGAEF-GFKAPSVMQTFGSRNDVNDKFKDGFKSVKISN 1061
Query: 932 SYRTVGSAKASITYLGKARKLV 953
Y+T+GS++A+IT+LGK RKL+
Sbjct: 1062 KYKTLGSSRAAITFLGKKRKLI 1083
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 62/109 (56%), Gaps = 11/109 (10%)
Query: 317 FSKESK--FIGLSNYENILKKDINKQNCIEFSDSEDETEVTSKVSRASKATILSIKANLS 374
+++E+K + L + +N + +DI ++ S E+ S KA +L+IKA +S
Sbjct: 399 YAEEAKPPLLPLQSMKNTVGQDI----ILDSSSDEEHASNQFATSTMVKAALLNIKAKIS 454
Query: 375 RH----KPAQSSINNKNALGNLFSDLKKATKAQILDHKKEIMEQKGYKM 419
++ K A+ SIN+ L LF LKKA K QILDH++EI E++G +
Sbjct: 455 KNMNLSKNAEQSINSP-TLKQLFISLKKANKKQILDHRREITEKRGISL 502
>KLTH0F00484g Chr6 complement(37017..39998) [2982 bp, 993 aa] {ON}
weakly similar to uniprot|P25588 Saccharomyces
cerevisiae YCL061C MRC1 S-phase checkpoint protein found
at replication forks required for DNA replication also
required for Rad53p activation during DNA replication
stress where it forms a replication-pausing complex with
Tof1p and is phosphorylated by Mec1p protein involved in
replication checkpoint
Length = 993
Score = 189 bits (481), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 132/326 (40%), Positives = 176/326 (53%), Gaps = 37/326 (11%)
Query: 644 MFEVEAEESEDEWHGIGGVDGELSDEYDSEVEKMIDDYSKENFNAGEIREKLAAENKDMD 703
+ + EAEES+DEWHGIGGVDGE D++DS++EKMIDDYS F++ E+R++ E D
Sbjct: 654 IIDYEAEESDDEWHGIGGVDGERFDDHDSDLEKMIDDYSNSRFDSSEVRKRQIEEEISED 713
Query: 704 LKMVNRILNDIKNGGFRKR-RNAXXXXXXXXXXXXXKAYRAKRRQLMKEKRLETDHNKKL 762
MVN+IL+DI+ GGFRKR RNA Y ++R++L+++K K L
Sbjct: 714 KSMVNKILHDIETGGFRKRGRNALDLELSDDDDEELLKYHSRRKELLRQKVSAQGEAKLL 773
Query: 763 MTNKKSHAFLESMVDDIVEVKNPFDERDDNIMDD--TPETDAEGDVNSNELLN-----KK 815
N KS AF E++V+DI R ++D P VN+ E N K
Sbjct: 774 AENPKSKAFFETIVEDI---------RSKGALEDEGPPPVRGFSSVNAPEEKNSDSDKKG 824
Query: 816 KKFILSEAFVQKSLSFLSSSRNLEEFEMNNNLAKEQHSHAAT-------DMFALKSHCSI 868
KK +LSEAFVQ++LSFL+S EE NNL +H + D+FALK + SI
Sbjct: 825 KKTVLSEAFVQQTLSFLTSGEVGEEKGPENNLGS-LPTHVPSFNTEETQDIFALKQNSSI 883
Query: 869 KSLESLP--GSHNNSISSKLDLLHEEIVSTPFSGLKQTSVXXXXXXXXXXXXXXXXGNKT 926
KSL S P S N I + DLL + + F+ + G KT
Sbjct: 884 KSL-SAPTRNSSNMLIDDQEDLLSRKRACSFFARFTK---------RVDANEKFEEGKKT 933
Query: 927 VKVSKSYRTVGSAKASITYLGKARKL 952
V+ SY+ GS+KASITYLGKARKL
Sbjct: 934 VRSLNSYKVAGSSKASITYLGKARKL 959
Score = 39.7 bits (91), Expect = 0.042, Method: Compositional matrix adjust. Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 363 KATILSIKANLSRHK-----PAQSSINNKNALGNLFSDLKKATKAQILDHKKEIMEQKG 416
KA IL +KA LS+ P +N ++ LF+ L+KA K+QILD++KE + KG
Sbjct: 360 KAAILDLKARLSKKSQSLLIPRSKVTSNFSSHQILFASLRKANKSQILDYRKEKYQSKG 418
>KLLA0C00484g Chr3 complement(35397..38174) [2778 bp, 925 aa] {ON}
weakly similar to uniprot|P25588 Saccharomyces
cerevisiae YCL061C MRC1 S-phase checkpoint protein found
at replication forks required for DNA replication also
required for Rad53p activation during DNA replication
stress where it forms a replication-pausing complex with
Tof1p and is phosphorylated by Mec1p protein involved in
replication checkpoint
Length = 925
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 117/300 (39%), Positives = 164/300 (54%), Gaps = 35/300 (11%)
Query: 656 WHGIGGVDGELSDEYDSEVEKMIDDYSKENFNAGEIREKLAAENKDMDLKMVNRILNDIK 715
WHG+GG DGE SD+YDS+++ MIDD+SK F+ IRE+LA ENK+MD +M+N+IL+DI
Sbjct: 630 WHGVGGADGENSDDYDSDLDTMIDDFSKSKFDTASIRERLALENKEMDERMINKILHDIN 689
Query: 716 NGGFRKR-RNAXXXXXXXXXXXXXKAYRAKRRQLMKEKRLETDHNKKLMTNKKSHAFLES 774
GGFRKR R A + +R KRR++MK+K LE + ++ N KS AF +S
Sbjct: 690 TGGFRKRGRGALDLELSDDEDELLRQFREKRREIMKQKLLE--NVDGVVNNSKSKAFFDS 747
Query: 775 MVDDIVEVKNPFDERDDNIMDDTPETDAEGDVNSNELLNKKKKFILSEAFVQKSLSFLSS 834
MV+DI P N D+ KKK ++SE FVQ SLSFLS+
Sbjct: 748 MVEDITRKSIPAVTSFSNTRDEM----------------GKKKIVISEEFVQSSLSFLSA 791
Query: 835 S-RNLEEFEMNNNLAKEQHSHAAT-DMFALKSHCSIKSLESLPGSHNNSISSKLDLLHEE 892
++ EFE+ + +H AT D+ +LK +IKSL+S P + NS ++
Sbjct: 792 KDDDINEFEVT------EAAHDATEDLESLKQRSNIKSLDS-PQRNRNSA------FFDD 838
Query: 893 IVSTPFSGLKQTSVXXXXXXXXXXXXXXXXGNKTVKVSKSYRTVGSAKASITYLGKARKL 952
+ T K S+ G KTV +SKSYR ++++IT+LGK RKL
Sbjct: 839 VDGTSLD-FKLPSIVKSFSSNSDVNDKFKTGIKTVTISKSYRVASGSRSAITFLGKKRKL 897
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust. Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 11/86 (12%)
Query: 340 QNCIEF---SDSEDETEVTSKVSRASKATILSIKANLSRHKPAQSS---INNKNALGNLF 393
QN IE S+SED+ + S++SKA +L IKA SR+K ++ ++ ++L LF
Sbjct: 319 QNVIELNSSSESEDDYK-----SQSSKAALLLIKAKRSRNKATKAKNMHVSTVDSLKELF 373
Query: 394 SDLKKATKAQILDHKKEIMEQKGYKM 419
+ LK + QIL+ ++EI +KG +
Sbjct: 374 TSLKTKNRDQILEFRREISGKKGISL 399
>AFR745W Chr6 (1803046..1806102) [3057 bp, 1018 aa] {ON} Syntenic
homolog of Saccharomyces cerevisiae YCL061C (MRC1)
Length = 1018
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 119/322 (36%), Positives = 172/322 (53%), Gaps = 30/322 (9%)
Query: 640 GITDMFEVEAEESEDEWHGIGGVDGELSDEYDSEVEKMIDDYSKENFNAGEIREKLAAEN 699
GIT M E+EAEESEDEWHGIGG D ELS++YDSEVEKMIDDYS + NA +R LA
Sbjct: 685 GITKMLEMEAEESEDEWHGIGGSDNELSEDYDSEVEKMIDDYSVHSSNADHLRAILAKNE 744
Query: 700 KDMDLKMVNRILNDIKNGGFRKR-RNAXXXXXXXXXXXXXKAYRAKRRQLMKEKRLETDH 758
+ D +VN+IL+DI GGFR+R + A + +R KRR+L+K+K LE
Sbjct: 745 RQHDENIVNKILHDISTGGFRRRGKGALDLEMSENEDQELQQFRQKRRELLKQKILENGD 804
Query: 759 NKKLMTNKKSHAFLESMVDDIVEVK--NPFDERDDNIMDDTPETDAEGDVNSNELLNKKK 816
KL++N KS+AF ++MVDD+ E N FD +D+ + A G +
Sbjct: 805 TSKLVSNPKSYAFFQTMVDDVTEASFGNTFDAN----IDEKTDPSAAG-----------R 849
Query: 817 KFILSEAFVQKSLSFLSSSRNLEEF--EMNNNLAKEQHSHAATDMFALKSHCSIKSLES- 873
K ++SE FV+++LSFLSS E E + + D+ LK + +IK L+
Sbjct: 850 KIVISEQFVKETLSFLSSKSGDSEIPAETKSISSSTVEREEIQDLHTLKQNSNIKHLKGS 909
Query: 874 --LPGSHNNSISSKLDLLHEEIVSTPFSGLKQTSVXXXXXXXXXXXXXXXXGNKTVKVSK 931
LP + +L + FS + S G K V++ K
Sbjct: 910 LELP-------AQMAELSSGDEGDYGFSLDRFRSAAKSFNNGTNVDDKFKSGTKAVRILK 962
Query: 932 SYRTVGSAKASITYLGKARKLV 953
+ +T+G +KA+IT++G+ R+L+
Sbjct: 963 ANKTIGGSKAAITFIGRKRRLI 984
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 69/253 (27%), Positives = 115/253 (45%), Gaps = 26/253 (10%)
Query: 186 YGKTQVD----KTQVDKTQVDKTQIFPTLVAD----DEIKHSSTAVQTVDDNTHSNSELK 237
YG T+VD TQ D Q + T D D+ + + QT+ H +L
Sbjct: 198 YGPTRVDDEVVATQQDSMGTADAQCWDTQTLDCALADDFQATIPDAQTLATARHE--KLF 255
Query: 238 INEIERQLDEEDQILKEKSMGTEYKRNIAPVMSKVK--FSKNDFLEHFXXXXXXXXXXGV 295
I++IE ++ + Q KE M T+ K AP + K K F+K++FL+ F G+
Sbjct: 256 IHQIEEEIATKTQ--KELPMMTQAKE--APYIPKQKLVFTKDNFLDSFDDDSETEIHGGL 311
Query: 296 ----VKLSSTEPETAAMNLENSLPQFSK----ESKFIGLSNYENILKKDINKQNCIEFSD 347
++S + E ++S P + + + L + K + I
Sbjct: 312 DGSDRQVSYNDREHTETGPQSSQPATGEGQDTQVLYPALQSLSITSKSYQEARQIILDES 371
Query: 348 SEDETEVTSKVSRASKATILSIKANLSRHKPAQSSINNKNALGN-LFSDLKKATKAQILD 406
SED+T+V S SKA +L+IKA S+ Q K++ N LF+ L+KA + Q+L+
Sbjct: 372 SEDDTDVNLS-SAVSKAAVLAIKARNSKFITPQKIDETKSSKSNELFAKLRKANREQLLE 430
Query: 407 HKKEIMEQKGYKM 419
++ +E++G M
Sbjct: 431 QRRNAIERRGINM 443
>Kwal_33.13005 s33 complement(36797..39709) [2913 bp, 970 aa] {ON}
YCL061C (MRC1) - protein involved in replication
checkpoint [contig 123] FULL
Length = 970
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 115/315 (36%), Positives = 166/315 (52%), Gaps = 22/315 (6%)
Query: 644 MFEVEAEESEDEWHGIGGVDGELSDEYDSEVEKMIDDYSKENFNAGEIREKLAAENKDMD 703
M + EAEES+DEW G+GG DGE SD YDSE+++MIDDYS + +R+KL E K D
Sbjct: 638 MIDFEAEESDDEWFGVGGADGENSDGYDSELDRMIDDYSNTKSDPEFLRKKLMEEEKLHD 697
Query: 704 LKMVNRILNDIKNGGFRKR-RNAXXXXXXXXXXXXXKAYRAKRRQLMKEKRLETDHNKKL 762
MV+RIL+DI+NGGFRKR R A Y A+R++L+ E++ L
Sbjct: 698 KDMVDRILHDIENGGFRKRGRYAMDLTLSDDEDDDLLRYHARRKELLNERKSGNQEISVL 757
Query: 763 MTNKKSHAFLESMVDDIVEVKNPFDERDDNIMDDTPETDAEGDVNSNELLNKKKKFILSE 822
TN KS AF +S+ +D ++K + +P A+ +++ K++ +SE
Sbjct: 758 ATNPKSKAFFDSIFED--DLKGGIANLKEYQSHASPLKAAKDEISG------KRETRISE 809
Query: 823 AFVQKSLSFLSSSRNLEEFEMNNNLAKEQHSHA-----ATDMFALKSHCSIKSLESLPGS 877
FVQK+LSFL S + + ++A Q S + ATD + LK IKS + S
Sbjct: 810 QFVQKTLSFLKSKEDEQGDAEFVSVADTQESSSGDFAEATDFYRLKQLSGIKSFSAPLRS 869
Query: 878 HNNSISSKLDLLHEEIVSTPFSGLKQTSVXXXXXXXXXXXXXXXXGNKTVKVSKSYRTVG 937
S +L + +++ V SG T++ G KTVK SY+ G
Sbjct: 870 -----SIRLQVRNKDGV---LSGKANTTLVERFVRSVDTNEKFEEGRKTVKSLNSYKIAG 921
Query: 938 SAKASITYLGKARKL 952
S++ASIT+LGKAR L
Sbjct: 922 SSRASITFLGKARSL 936
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 38/113 (33%), Positives = 65/113 (57%), Gaps = 8/113 (7%)
Query: 312 NSLPQFSKESKFIGLSNYENILKKDINKQNCIEFSDSEDETEVTSKVSRASKATILSIKA 371
N LP S+ F L Y ILK+ + N +EFS S+DE ++ S +SKA IL +KA
Sbjct: 291 NVLPSISE--GFAPLQLYHTILKQRLTDANSVEFSSSDDEKSSEAR-SLSSKAAILDLKA 347
Query: 372 NLSRHKPAQSSINNKN-----ALGNLFSDLKKATKAQILDHKKEIMEQKGYKM 419
+S+ K + + ++K +L +LFS L+KA + Q+++H+ ++ +G +
Sbjct: 348 RMSKKKQSLAVTSSKETMPSASLRHLFSSLRKANRDQLVEHRNGLLLLRGVDL 400
>Suva_7.197 Chr7 (361661..364201) [2541 bp, 846 aa] {ON} YGL073W
(REAL)
Length = 846
Score = 40.4 bits (93), Expect = 0.022, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 189 TQVDKTQVDKTQVDKTQIFPTLVADDEIKHSSTAVQTVDDNTHSNSELKINEIERQLDEE 248
T+ +QV++ D ++ T+++DD++K S A + DDN H+ S+L ++ + R +DE+
Sbjct: 586 TRNPASQVNENAFDPSRF--TMLSDDDLKKDSHAHRIADDNKHNESDLFLDNVHRNIDEQ 643
Query: 249 DQILK 253
D L+
Sbjct: 644 DARLQ 648
>KLTH0D06556g Chr4 complement(570972..572342) [1371 bp, 456 aa] {ON}
similar to uniprot|P38153 Saccharomyces cerevisiae
YBR288C APM3 Mu3-like subunit of the yeast AP-3 complex
which functions in transport of alkaline phosphatase to
the vacuole via the alternate pathway clathrin
associated protein medium chain
Length = 456
Score = 33.1 bits (74), Expect = 4.1, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 839 EEFEMNNNLAKEQHSHAATDMF------ALKSHCSIKSLESLPGSHNNSISSKL 886
+EFE+N N+A QH+ D+ L S C IK L S G N S+ +
Sbjct: 322 DEFEVNLNIAGSQHAKVVDDLVITLSFGPLPSECKIKVLRSTHGHFENCASNNI 375
>KNAG0A07130 Chr1 complement(1119805..1120509) [705 bp, 234 aa] {ON}
Anc_2.558 YKL041W
Length = 234
Score = 32.0 bits (71), Expect = 5.6, Method: Compositional matrix adjust. Identities = 18/40 (45%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Query: 661 GVDGELSDEYDSEVEKMIDDYSKENFN-AGEIRE-KLAAE 698
G D EL +E D+EV K+++ Y+ E F+ G + E +LAAE
Sbjct: 153 GEDTELDEEVDAEVNKIVEQYTSEQFSKVGTVPEDRLAAE 192
>Suva_1.24 Chr1 (39893..42442) [2550 bp, 849 aa] {ON} YAL041W (REAL)
Length = 849
Score = 32.0 bits (71), Expect = 9.7, Method: Compositional matrix adjust. Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 13/73 (17%)
Query: 199 TQVDKTQIFPTLV-----ADDEIKHSSTAVQTVDDNTHSNSELKINEIERQLDEEDQILK 253
T V+ ++IF LV DD I TA+ + NTHS+S L IN+I+ Q ++ D ++
Sbjct: 768 TNVNNSEIFTLLVERVWNFDDLI----TAINSKISNTHSSSALPINKIKYQDEDGDFVI- 822
Query: 254 EKSMGTEYKRNIA 266
+G++ N+A
Sbjct: 823 ---LGSDEDWNVA 832
Database: Seq/AA.fsa
Posted date: Aug 24, 2012 3:22 PM
Number of letters in database: 53,481,399
Number of sequences in database: 114,666
Lambda K H
0.308 0.126 0.332
Gapped Lambda K H 0.267 0.0410 0.140
Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 114666 Number of Hits to DB: 83,992,399 Number of extensions: 3497307 Number of successful extensions: 21919 Number of sequences better than 10.0: 149 Number of HSP's gapped: 22745 Number of HSP's successfully gapped: 190 Length of query: 985 Length of database: 53,481,399 Length adjustment: 119 Effective length of query: 866 Effective length of database: 39,836,145 Effective search space: 34498101570 Effective search space used: 34498101570 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits) S2: 71 (32.0 bits)